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5XBP

Oxygenase component of 3-nitrotoluene dioxygenase from Diaphorobacter sp. strain DS2

Replaces:  5BRC
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
Collection date2014-06-20
DetectorADSC QUANTUM 210r
Wavelength(s)0.976
Spacegroup nameP 31 2 1
Unit cell lengths178.804, 178.804, 242.323
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.711 - 2.900
R-factor0.2415
Rwork0.241
R-free0.28390
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ndo
RMSD bond length0.011
RMSD bond angle1.306
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.7112.950
High resolution limit [Å]2.9002.900
Rmerge0.1701.346
Rpim0.1131.043
Number of reflections957354714
<I/σ(I)>7.4
Completeness [%]96.896.6
Redundancy5.23.4
CC(1/2)0.984
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2770.2M sodium citrate tribasic, 18-20% PEG 3350

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