Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X86

Crystal structure of TMP bound thymidylate kinase from thermus thermophilus HB8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2014-09-24
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.8265
Spacegroup nameP 21 21 21
Unit cell lengths46.901, 47.435, 152.062
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.010 - 1.190
R-factor0.14183
Rwork0.141
R-free0.16790
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5x7j
RMSD bond length0.014
RMSD bond angle1.934
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0101.210
High resolution limit [Å]1.1901.190
Number of reflections108625
<I/σ(I)>1.8
Completeness [%]99.0
Redundancy5.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH2950.2M MgCl2.6H2O, 0.1 M Tris hydrochloride, 30% PEG 4000

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon