5WYM
Crystal structure of an anti-connexin26 scFv
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2016-03-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.987 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 119.489, 119.489, 94.106 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 2.650 |
R-factor | 0.237 |
Rwork | 0.236 |
R-free | 0.26320 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ghw |
RMSD bond length | 0.007 |
RMSD bond angle | 1.116 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 7.190 | 2.700 |
High resolution limit [Å] | 2.650 | 5.710 | 2.650 |
Rmerge | 0.101 | 0.073 | 0.367 |
Rmeas | 0.108 | 0.078 | 0.429 |
Rpim | 0.038 | 0.025 | 0.210 |
Number of reflections | 19583 | ||
<I/σ(I)> | 5.4 | ||
Completeness [%] | 96.1 | 99 | 92.4 |
Redundancy | 6.6 | 8.6 | 4 |
CC(1/2) | 0.996 | 0.001 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES, 3 M NaCl |