5WRN
Human thymidylate synthase complexed with dCMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-03-22 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 1.000001 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 110.096, 110.096, 317.268 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.390 |
R-factor | 0.1906 |
Rwork | 0.188 |
R-free | 0.24730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1hvy |
RMSD bond length | 0.015 |
RMSD bond angle | 1.766 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.430 |
High resolution limit [Å] | 2.390 | 6.470 | 2.390 |
Rmerge | 0.067 | 0.031 | 0.315 |
Rmeas | 0.071 | 0.033 | 0.332 |
Rpim | 0.022 | 0.010 | 0.102 |
Total number of observations | 711815 | ||
Number of reflections | 76815 | ||
<I/σ(I)> | 13.3 | ||
Completeness [%] | 98.4 | 99.2 | 94.2 |
Redundancy | 9.3 | 10 | 8.5 |
CC(1/2) | 0.999 | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 100 mM Sodium cacodylate 15% PEG 4000 |