5WOB
Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin
Replaces: 4Q5ZExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-11 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 121.589, 138.190, 376.509 |
Unit cell angles | 90.00, 99.36, 90.00 |
Refinement procedure
Resolution | 49.543 - 3.950 |
R-factor | 0.2439 |
Rwork | 0.243 |
R-free | 0.29100 |
Starting model (for MR) | 4iof |
RMSD bond length | 0.002 |
RMSD bond angle | 0.453 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.020 |
High resolution limit [Å] | 3.950 | 3.950 |
Rmerge | 0.200 | 0.672 |
Rpim | 0.130 | 0.424 |
Number of reflections | 108370 | 5406 |
<I/σ(I)> | 7 | 2.1 |
Completeness [%] | 99.5 | 99.8 |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.583 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291.15 | 0.1M Sodium cacodylate, pH6.5; 0.2M MgCl2; 10% PEG3000, VAPOR DIFFUSION, HANGING DROP, temperature 291.15K |