5W82
Crystal structure of Orsay virus delta protein N-terminal fragment (aa 1-101)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2016-06-11 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97857 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.746, 58.220, 163.235 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.030 - 1.800 |
R-factor | 0.188 |
Rwork | 0.186 |
R-free | 0.22600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5jie |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2152) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.107 | 0.833 |
Rmeas | 0.122 | 0.042 |
Rpim | 0.058 | 0.019 |
Total number of observations | 196759 | |
Number of reflections | 49567 | |
<I/σ(I)> | 4.5 | |
Completeness [%] | 98.6 | 95.7 |
Redundancy | 4 | 3.1 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 0.1 M Ammonium sulfate, 0.1M Sodium acetate pH 4.6, 25% (w/w) PEG 4000 |