Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5W82

Crystal structure of Orsay virus delta protein N-terminal fragment (aa 1-101)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]77
Detector technologyCCD
Collection date2016-06-11
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97857
Spacegroup nameP 21 21 21
Unit cell lengths55.746, 58.220, 163.235
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.030 - 1.800
R-factor0.188
Rwork0.186
R-free0.22600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jie
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.10_2152)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.830
High resolution limit [Å]1.8001.800
Rmerge0.1070.833
Rmeas0.1220.042
Rpim0.0580.019
Total number of observations196759
Number of reflections49567
<I/σ(I)>4.5
Completeness [%]98.695.7
Redundancy43.1
CC(1/2)0.998
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.62930.1 M Ammonium sulfate, 0.1M Sodium acetate pH 4.6, 25% (w/w) PEG 4000

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon