5W53
Crystal structure of the erythrocyte-binding domain from Plasmodium vivax reticulocyte-binding protein 2b (PvRBP2b)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.500, 124.200, 65.310 |
Unit cell angles | 90.00, 97.75, 90.00 |
Refinement procedure
Resolution | 34.170 - 1.710 |
R-factor | 0.168 |
Rwork | 0.168 |
R-free | 0.18800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4z8n |
RMSD bond length | 0.014 |
RMSD bond angle | 1.321 |
Data reduction software | iMOSFLM (1.0.7) |
Data scaling software | Aimless (0.2.7) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.870 | 1.740 |
High resolution limit [Å] | 1.710 | 1.710 |
Rmerge | 0.111 | 1.711 |
Number of reflections | 100494 | |
<I/σ(I)> | 10 | 1.2 |
Completeness [%] | 99.4 | 98.8 |
Redundancy | 7.4 | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 22% W/V PEG3350, 200 MM POTASSIUM THIOCYANATE, 100 MM BIS-TRIS-HCL, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 295K |