5W42
Crystal structure of human monoclonal antibody H3v-47 in complex with influenza virus hemagglutinin from A/Minnesota/11/2010 (H3N2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 3 |
Unit cell lengths | 194.622, 194.622, 194.622 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.924 - 3.569 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.22760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yp2 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.988 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.630 |
High resolution limit [Å] | 3.569 | 3.570 |
Rmerge | 0.112 | 0.784 |
Rpim | 0.045 | 0.584 |
Number of reflections | 29479 | 1441 |
<I/σ(I)> | 14.8 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.1 | 10.1 |
CC(1/2) | 0.607 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277 | 10% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.1M MES (pH 5.0) |