5W3V
Crystal Structure of macaque APOBEC3H in complex with RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-08 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.283 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 87.960, 89.310, 134.370 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.655 - 2.243 |
R-factor | 0.1839 |
Rwork | 0.182 |
R-free | 0.22150 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.527 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | AutoSol |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.800 | |
High resolution limit [Å] | 2.590 | |
Rmerge | 0.086 | 1.080 |
Number of reflections | 69877 | |
<I/σ(I)> | 15.7 | |
Completeness [%] | 100.0 | |
Redundancy | 7.1 | |
CC(1/2) | 1.000 | 0.640 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.1M Tris:HCl pH 8.5 0.1M MgCl2 28% PEG 4000 |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.1M Tris:HCl pH 8.5 0.1M MgCl2 28% PEG 4000 |