5W32
Crystal structure of mutant CJ YCEI protein (CJ-N48C) with selenocysteine guest structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-04-04 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.0 |
Spacegroup name | P 6 2 2 |
Unit cell lengths | 178.621, 178.621, 50.807 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.700 - 2.600 |
R-factor | 0.2151 |
Rwork | 0.214 |
R-free | 0.23600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w2x |
RMSD bond length | 0.015 |
RMSD bond angle | 2.051 |
Data reduction software | XDS (20161101) |
Data scaling software | SCALA (3.3.22) |
Phasing software | REFMAC (5.8.0158) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.700 | 38.673 | 2.770 |
High resolution limit [Å] | 2.600 | 8.320 | 2.630 |
Rmerge | 0.036 | 1.614 | |
Rmeas | 0.099 | 0.038 | 1.683 |
Rpim | 0.022 | 0.009 | 0.464 |
Number of reflections | 14539 | ||
<I/σ(I)> | 25.5 | 14 | 0.4 |
Completeness [%] | 98.8 | 98 | 92.5 |
Redundancy | 19.8 | 17.8 | 12.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293 | 3.2 M Ammonium Sulfate, 0.1 M Bis-Tris |