5W0Z
Crystal structure of MBP fused activation-induced cytidine deaminase (AID)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-03-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.680, 167.650, 188.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 3.610 |
R-factor | 0.27601 |
Rwork | 0.274 |
R-free | 0.30693 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w0r |
RMSD bond length | 0.008 |
RMSD bond angle | 1.201 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 188.300 | 3.740 |
High resolution limit [Å] | 3.600 | 3.610 |
Rpim | 0.743 | |
Number of reflections | 12574 | 11572 |
<I/σ(I)> | 6.4 | 1 |
Completeness [%] | 99.8 | 99.8 |
Redundancy | 7.9 | 8.1 |
CC(1/2) | 0.688 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.26 M NaCl, 0.1 M MES pH 6.0, 12% PEG3350 |