5VYG
Crystal structure of hFA9 EGF repeat with O-glucose trisaccharide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-06 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 92.417, 46.840, 37.259 |
Unit cell angles | 90.00, 92.58, 90.00 |
Refinement procedure
Resolution | 46.160 - 2.200 |
R-factor | 0.21448 |
Rwork | 0.212 |
R-free | 0.25895 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1edm |
RMSD bond length | 0.009 |
RMSD bond angle | 1.490 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.320 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.104 | 0.515 |
Number of reflections | 7814 | 1200 |
<I/σ(I)> | 12.6 | 4.5 |
Completeness [%] | 99.8 | 100 |
Redundancy | 7.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris pH 8.5, 15% Glycerol, 1.6 M (NH4)2SO4, 5% 2,2,2-Trifluoroethanol |