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5VS0

Human DNA polymerase beta 8-oxoG:dC extension with dTTP after 80 s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-11-12
DetectorRAYONIX MX300HE
Wavelength(s)0.97931
Spacegroup nameP 1 21 1
Unit cell lengths50.600, 80.300, 55.400
Unit cell angles90.00, 107.60, 90.00
Refinement procedure
Resolution52.810 - 2.100
R-factor0.2048
Rwork0.202
R-free0.26210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4rpx
RMSD bond length0.010
RMSD bond angle1.490
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]52.81052.8102.200
High resolution limit [Å]2.10012.0002.100
Rmerge0.0660.0290.317
Rmeas0.0920.0400.438
Total number of observations90731
Number of reflections470601706261
<I/σ(I)>8.8424.042.45
Completeness [%]96.864.998.7
Redundancy1.9281.7531.906
CC(1/2)0.9950.9950.728
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29350 mM imidazole pH 7.0-7.5, 350 mM sodium acetate, 16-18% PEG 3350

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