5VRH
Apolipoprotein N-acyltransferase C387S active site mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-15 |
Detector | MARRESEARCH |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.671, 72.586, 75.610 |
Unit cell angles | 90.00, 101.73, 90.00 |
Refinement procedure
Resolution | 42.041 - 2.137 |
R-factor | 0.2086 |
Rwork | 0.207 |
R-free | 0.25010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 5VRG |
RMSD bond length | 0.002 |
RMSD bond angle | 0.648 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (dev_2747) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.041 | 72.586 | 2.144 |
High resolution limit [Å] | 2.137 | 9.912 | 2.137 |
Rmeas | 0.159 | 0.070 | 0.840 |
Rpim | 0.071 | 0.036 | 0.385 |
Number of reflections | 30232 | ||
<I/σ(I)> | 9.7 | ||
Completeness [%] | 97.4 | 100 | 94.5 |
Redundancy | 5 | 4.8 | 4.6 |
CC(1/2) | 0.973 | 0.862 | 0.707 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.7 | 293 | 0.1 M MES pH 5.7 - 6.3, 27% PEG 500 DME, 0.1 M sodium chloride, 0.1 M magnesium chloride, and 0.01 M copper(II) chloride dihydrate |