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5VRB

Crystal structure of a transketolase from Neisseria gonorrhoeae

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2017-05-03
DetectorADSC QUANTUM 315r
Wavelength(s)1.000
Spacegroup nameP 1 21 1
Unit cell lengths82.450, 114.210, 125.690
Unit cell angles90.00, 90.11, 90.00
Refinement procedure
Resolution37.591 - 1.850
R-factor0.1509
Rwork0.150
R-free0.19070
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2r8o
RMSD bond length0.006
RMSD bond angle0.769
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]37.59137.5911.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0710.0310.455
Rmeas0.0860.0380.557
Number of reflections195499222914301
<I/σ(I)>12.930.272.83
Completeness [%]98.796.998.1
Redundancy3.1523.0562.935
CC(1/2)0.9960.9970.744
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5289NegoA.01294.a.B1.PS37968 at 22.9 mg/mL against MCSG1 screen condition E9 0.2 M calcium chloride, 25% PEG 3350, cryo-protected with 15% ethylene glycol, 1 mM TPP, 2 mM CaCl2, crystal tracking ID 282795e9, unique puck ID pap7-3

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PDB entries from 2024-10-16

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