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5VR4

RNA octamer containing 2'-F-4'-OMe U.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-07-01
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameP 43 21 2
Unit cell lengths44.387, 44.387, 85.921
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.481 - 1.500
R-factor0.189
Rwork0.186
R-free0.24250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p4a
RMSD bond length0.009
RMSD bond angle1.804
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.530
High resolution limit [Å]1.5001.500
Rmerge0.0670.795
Rpim0.0270.317
Number of reflections26152
<I/σ(I)>21.052.73
Completeness [%]99.6100
Redundancy7.37.3
CC(1/2)0.943
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.62930.5 mM RNA, 10 mM Cobalt(III) hexamine, 6 mM sodium chloride, 40 mM potassium chloride, 5% MPD, 20 mM sodium cacodylate equilibrated against reservoir containing 40% MPD

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