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5VQM

Clostridium difficile TcdB-GTD bound to PA41 Fab

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2015-02-11
DetectorRAYONIX MX-225
Wavelength(s)0.97872
Spacegroup nameC 2 2 21
Unit cell lengths96.130, 251.740, 224.450
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution60.849 - 2.790
R-factor0.2424
Rwork0.240
R-free0.29160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2bvm 3l5x
RMSD bond length0.002
RMSD bond angle0.455
Data reduction softwarexia2
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((1.12_2829))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]60.8502.840
High resolution limit [Å]2.7902.790
Rmerge0.1611.526
Number of reflections680123378
<I/σ(I)>7.5
Completeness [%]99.999.9
Redundancy8.56.3
CC(1/2)0.9960.569
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.52940.1 M Bis-Tris pH 5.5 1 M NaCl 11% PEG3350

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