5VPV
Crystal structure of Apo Cryptococcus neoformans H99 Acetyl-CoA Synthetase with an Acetylated Active Site Lysine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-18 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 176.980, 176.980, 159.920 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.277 - 2.600 |
R-factor | 0.1591 |
Rwork | 0.156 |
R-free | 0.21620 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.843 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX (dev_2744) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.277 | 2.670 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.160 | 0.521 |
Number of reflections | 78331 | |
<I/σ(I)> | 12.18 | 5.02 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.4 | |
CC(1/2) | 0.992 | 0.952 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | RigakuReagents Morpheus H3: 10.0% w/v PEG4,000, 20% glycerol, 0.02M amino acid mix, 0.1M MES/imidazole pH6.5; CrneC.00629.a.FS11.PD00402 at 10.0mg/ml; Crystals were directly cryo-protected. Puck lrm5-1 |