5VN2
Crystal structure of 3-oxoacyl-[acyl-carrier protein] reductase from Brucella melitensis in complex with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-22 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 74.560, 92.710, 129.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.900 |
R-factor | 0.1512 |
Rwork | 0.150 |
R-free | 0.19830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4one |
RMSD bond length | 0.006 |
RMSD bond angle | 0.773 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((dev_2744)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.950 |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.073 | 0.020 | 0.557 |
Rmeas | 0.081 | 0.022 | 0.617 |
Number of reflections | 71305 | 858 | 5232 |
<I/σ(I)> | 17.22 | 57.84 | 2.99 |
Completeness [%] | 99.6 | 94.3 | 99.9 |
Redundancy | 5.407 | 4.783 | 5.407 |
CC(1/2) | 0.999 | 1.000 | 0.858 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 290 | MCSG1 F5 (273386f5): 20% PEG3350, 20mM Sodium acetate, 4mM NAD, protein conc. 19.9mg/mL, cryo 15% ethylene glycol: unique puck ID: jif2-4 |