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5VN1

horse liver alcohol dehydrogenae complexed with NADH (R,S)-N-1-methylhexylformamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-4
Synchrotron siteESRF
BeamlineID14-4
Temperature [K]100
Detector technologyCCD
Collection date1999-03-01
DetectorMAR CCD 165 mm
Wavelength(s)0.936
Spacegroup nameP 1 21 1
Unit cell lengths50.212, 180.808, 86.841
Unit cell angles90.00, 106.12, 90.00
Refinement procedure
Resolution20.000 - 1.250
R-factor0.1517
Rwork0.151
R-free0.18660
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1p1r
RMSD bond length0.017
RMSD bond angle1.885
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareX-PLOR
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]20.00020.0001.250
High resolution limit [Å]1.20011.0001.200
Rmerge0.1220.0730.318
Rmeas0.1510.0930.426
Total number of observations680160
Number of reflections38601642435753
<I/σ(I)>5.778.892.2
Completeness [%]83.882.867.5
Redundancy1.7623.5641.518
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICRODIALYSIS727810 mg protein/ml dialyzed against 50 mM ammonium N-[tris(hydroxymethyl)methyl]-2-aminoethanesulfonate buffer, pH 7 (pH 6.7 at 25 deg C) with 1 mM NADH and 10 mM (racemic) (R,S)-N-1-methylhexylformamide as the concentration of 2-methyl-2,4-pentanediol was raised to 25%. Crystal on loop plunged into liquid N2.

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PDB entries from 2024-07-17

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