5VN1
horse liver alcohol dehydrogenae complexed with NADH (R,S)-N-1-methylhexylformamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 1999-03-01 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.936 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.212, 180.808, 86.841 |
Unit cell angles | 90.00, 106.12, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.250 |
R-factor | 0.1517 |
Rwork | 0.151 |
R-free | 0.18660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1p1r |
RMSD bond length | 0.017 |
RMSD bond angle | 1.885 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | X-PLOR |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 20.000 | 20.000 | 1.250 |
High resolution limit [Å] | 1.200 | 11.000 | 1.200 |
Rmerge | 0.122 | 0.073 | 0.318 |
Rmeas | 0.151 | 0.093 | 0.426 |
Total number of observations | 680160 | ||
Number of reflections | 386016 | 424 | 35753 |
<I/σ(I)> | 5.77 | 8.89 | 2.2 |
Completeness [%] | 83.8 | 82.8 | 67.5 |
Redundancy | 1.762 | 3.564 | 1.518 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICRODIALYSIS | 7 | 278 | 10 mg protein/ml dialyzed against 50 mM ammonium N-[tris(hydroxymethyl)methyl]-2-aminoethanesulfonate buffer, pH 7 (pH 6.7 at 25 deg C) with 1 mM NADH and 10 mM (racemic) (R,S)-N-1-methylhexylformamide as the concentration of 2-methyl-2,4-pentanediol was raised to 25%. Crystal on loop plunged into liquid N2. |