5VIU
Crystal Structure of Acetylornithine Aminotransferase from Elizabethkingia anophelis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-03-22 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 136.600, 77.470, 104.960 |
Unit cell angles | 90.00, 129.46, 90.00 |
Refinement procedure
Resolution | 42.354 - 1.650 |
R-factor | 0.1558 |
Rwork | 0.155 |
R-free | 0.18010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oat |
RMSD bond length | 0.006 |
RMSD bond angle | 0.806 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MoRDa |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.354 | 42.354 | 1.690 |
High resolution limit [Å] | 1.650 | 7.380 | 1.650 |
Rmerge | 0.037 | 0.018 | 0.514 |
Rmeas | 0.043 | 0.022 | 0.601 |
Total number of observations | 384308 | ||
Number of reflections | 101355 | 1176 | 7472 |
<I/σ(I)> | 20.68 | 59.5 | 2.52 |
Completeness [%] | 99.4 | 96.1 | 99.5 |
Redundancy | 3.792 | 3.51 | 3.761 |
CC(1/2) | 0.999 | 0.999 | 0.862 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 290 | ElanA.01026.a.B1.PW37983 at 19.6 mg/ml, incubated with 3 mM ornithine and alpha-ketoglutaric acid and mixed 1:1 with an equal volume JCSG+(a3): 20% (w/v) PEG-3350, 200 mM ammonium citrate dibasic, cryoprotected with 20% ethylene glycol |