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5VD2

crystal structure of human WEE1 kinase domain in complex with PF-03814735

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2016-11-09
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.00
Spacegroup nameP 1 21 1
Unit cell lengths50.520, 45.710, 59.440
Unit cell angles90.00, 102.52, 90.00
Refinement procedure
Resolution34.109 - 2.050
R-factor0.206
Rwork0.203
R-free0.25550
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5v5y
RMSD bond length0.003
RMSD bond angle0.562
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]34.10934.1092.100
High resolution limit [Å]2.0509.1702.050
Rmerge0.0350.0250.262
Rmeas0.0420.0320.316
Number of reflections166391891221
<I/σ(I)>20.1945.274.65
Completeness [%]98.889.699.7
Redundancy3.1422.8253.131
CC(1/2)0.9990.9950.950
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.92919.0 MG/ML WEE1, 25 mM Na/K phosphate, 1 mM DTT, 0.05 M ammonium sulfate, 0.05 M Bis-tris (pH 5.5), 7.5 % PEG 3350, 1 mM PF-03814735

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PDB entries from 2024-08-07

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