5V8G
Pekin duck lysozyme isoform I (DEL-I)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.200, 65.400, 31.640 |
Unit cell angles | 90.00, 113.24, 90.00 |
Refinement procedure
Resolution | 32.700 - 1.200 |
R-factor | 0.1468 |
Rwork | 0.145 |
R-free | 0.18030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1iee |
RMSD bond length | 0.013 |
RMSD bond angle | 1.578 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.5.17) |
Phasing software | PHASER (2.5.7) |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.700 | 32.700 | 1.220 |
High resolution limit [Å] | 1.200 | 6.580 | 1.200 |
Rmerge | 0.080 | 0.060 | 0.481 |
Rmeas | 0.090 | 0.069 | 0.547 |
Rpim | 0.041 | 0.033 | 0.255 |
Number of reflections | 30531 | ||
<I/σ(I)> | 10.2 | ||
Completeness [%] | 93.5 | 44 | 88.6 |
Redundancy | 4.7 | 4.1 | 4.3 |
CC(1/2) | 0.996 | 0.988 | 0.847 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 200 mM potassium thiocyanate, 100 mM Bis-Tris-propane, pH 8.5, 20% PEG3350 |