Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V8G

Pekin duck lysozyme isoform I (DEL-I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2016-06-17
DetectorADSC QUANTUM 315r
Wavelength(s)0.9537
Spacegroup nameP 1 21 1
Unit cell lengths28.200, 65.400, 31.640
Unit cell angles90.00, 113.24, 90.00
Refinement procedure
Resolution32.700 - 1.200
R-factor0.1468
Rwork0.145
R-free0.18030
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1iee
RMSD bond length0.013
RMSD bond angle1.578
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.5.17)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]32.70032.7001.220
High resolution limit [Å]1.2006.5801.200
Rmerge0.0800.0600.481
Rmeas0.0900.0690.547
Rpim0.0410.0330.255
Number of reflections30531
<I/σ(I)>10.2
Completeness [%]93.54488.6
Redundancy4.74.14.3
CC(1/2)0.9960.9880.847
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5293200 mM potassium thiocyanate, 100 mM Bis-Tris-propane, pH 8.5, 20% PEG3350

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon