5V42
Crystal Structure of Mtb Pks13 Thioesterase domain in complex with inhibitor TAM3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-10 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0032 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 89.362, 109.399, 56.895 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.763 - 1.987 |
R-factor | 0.1963 |
Rwork | 0.194 |
R-free | 0.23330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v3w |
RMSD bond length | 0.008 |
RMSD bond angle | 1.119 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.987 | 5.400 | 1.990 |
Rmerge | 0.106 | 0.042 | |
Rmeas | 0.110 | 0.047 | |
Rpim | 0.053 | 0.019 | 0.633 |
Number of reflections | 34501 | ||
<I/σ(I)> | 8.1 | ||
Completeness [%] | 88.0 | 86.1 | 83.8 |
Redundancy | 5.2 | 5.6 | 4.4 |
CC(1/2) | 0.998 | 0.458 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | 0.1 M Tris-HCl, 2.0-1.8 M ammonium sulfate, 2%-5% v/v PPG P400 |