5V26
1.78 angstrom crystal structure of P97H 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-08-01 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.229, 57.692, 79.501 |
Unit cell angles | 90.00, 103.82, 90.00 |
Refinement procedure
Resolution | 38.600 - 1.790 |
R-factor | 0.2 |
Rwork | 0.198 |
R-free | 0.24000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yfu |
RMSD bond length | 0.007 |
RMSD bond angle | 0.887 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.850 |
High resolution limit [Å] | 1.790 | 3.860 | 1.790 |
Rmerge | 0.129 | 0.084 | 0.797 |
Rmeas | 0.139 | 0.090 | 0.870 |
Rpim | 0.050 | 0.033 | 0.343 |
Number of reflections | 37328 | ||
<I/σ(I)> | 5.4 | ||
Completeness [%] | 98.9 | 99.9 | 89.6 |
Redundancy | 7.3 | 7.5 | 5.7 |
CC(1/2) | 0.994 | 0.787 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289 | 100 mM Tris-HCl, 200 mM MgCl2, 20% PEG 8000, and 1 mM DTT, pH 8.0 |