Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V0U

Crystal structure of polymerase acid protein (PA) from Influenza A virus, WILSON-SMITH/1933 (H1N1) bound to follow on fragment EBSI-4723 4-(5-chlorothiophen-2-yl)-1H-pyrazole

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2017-02-24
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 65 2 2
Unit cell lengths68.850, 68.850, 396.330
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution41.057 - 2.450
R-factor0.1735
Rwork0.170
R-free0.23680
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4iuj
RMSD bond length0.007
RMSD bond angle0.796
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.05741.0572.510
High resolution limit [Å]2.45010.9602.450
Rmerge0.0920.0460.572
Rmeas0.0950.0490.591
Total number of observations314150
Number of reflections229643211536
<I/σ(I)>20.6639.484.75
Completeness [%]99.996.7100
Redundancy14.43810.3314.951
CC(1/2)0.9980.9960.941
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529320 mg/mL protein against Morpheus screen condition H6 10% PEG 8000, 20% EG, 0.02 M each amino acid, 0.1 M MOPS/Hepes pH 7.5 soaked with BSI4723 for 6 days at 25 mM from a 250 mM stock solution in DMSO-d6

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon