5V0S
Crystal structure of the ACT domain of prephenate dehydrogenase tyrA from Bacillus anthracis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-21 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 48.070, 48.070, 233.395 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.630 - 2.010 |
R-factor | 0.1737 |
Rwork | 0.171 |
R-free | 0.23230 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.501 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | SHELX |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.053 | 0.037 | 0.619 |
Rmeas | 0.057 | 0.040 | 0.653 |
Rpim | 0.018 | 0.014 | 0.195 |
Number of reflections | 11294 | 482 | |
<I/σ(I)> | 9.8 | 1.7 | |
Completeness [%] | 96.9 | 93.6 | 88.1 |
Redundancy | 7.4 | 6.4 | 7.5 |
CC(1/2) | 0.999 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 0.2 ul of 15 mg/ml protein in 20 mM HEPES pH 7.5, 500 mM NaCl, 5% Glycerol, and 10 mM BME were mixed with 0.2 ul of the MCSG Suite I condition #31 (0.1 M Tris pH=8.5, 0.2 M Calcium chloride, 25% w/v PEG 4000) and equilibrated against 1.5 M NaCl solution in 96 Well 3 drop Crystallization Plate (Swissci). Before crystallization protein was incubated with 1/50 v/v of 2 mg/ml chymotrypsin solution at 289 K for 3 hours. |