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5UPF

Crystal structure of human NAMPT with isoindoline urea inhibitor compound 53

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2012
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000000
Spacegroup nameP 1 21 1
Unit cell lengths61.104, 106.578, 83.337
Unit cell angles90.00, 96.86, 90.00
Refinement procedure
Resolution24.740 - 1.690
R-factor0.217
Rwork0.215
R-free0.24100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gvj
RMSD bond length0.010
RMSD bond angle1.030
Data reduction softwareXDS ((VERSION May 1))
Data scaling softwareAimless
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.7401.695
High resolution limit [Å]1.6901.690
Rmerge0.1110.655
Rmeas0.1320.749
Rpim0.0720.437
Total number of observations339858
Number of reflections109884
<I/σ(I)>9.72.1
Completeness [%]92.875.2
Redundancy3.12.5
CC(1/2)0.9820.789
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27725% PEG 3350, 0.2 M ammonium sulfate, and 0.1 M HEPES, pH 7.5

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