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5UPE

Crystal structure of human NAMPT with isoindoline urea inhibitor compound 5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 17-ID
Synchrotron siteAPS
Beamline17-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2010
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.000000
Spacegroup nameP 1 21 1
Unit cell lengths61.073, 106.448, 83.109
Unit cell angles90.00, 96.63, 90.00
Refinement procedure
Resolution28.260 - 1.930
R-factor0.189
Rwork0.187
R-free0.21700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2gvj
RMSD bond length0.010
RMSD bond angle1.070
Data reduction softwareXDS ((VERSION May 1))
Data scaling softwareAimless
Refinement softwareBUSTER (2.11.7)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]82.5501.940
High resolution limit [Å]1.9301.933
Rmerge0.1020.865
Rmeas0.1220.787
Rpim0.0660.417
Number of reflections78276
<I/σ(I)>8.91.5
Completeness [%]99.397.7
Redundancy3.33.4
CC(1/2)0.9950.840
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27725% PEG 3350, 0.2 M ammonium sulfate, and 0.1 M HEPES, pH 7.5

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