5UK4
VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9791 |
Spacegroup name | P 1 |
Unit cell lengths | 147.555, 156.008, 217.450 |
Unit cell angles | 79.24, 75.66, 62.27 |
Refinement procedure
Resolution | 128.352 - 3.204 |
R-factor | 0.237 |
Rwork | 0.236 |
R-free | 0.28770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2GIC (VSV N) and 5TJW (VHH) |
RMSD bond length | 0.002 |
RMSD bond angle | 0.525 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 128.450 | 3.310 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.200 | 0.675 |
Rpim | 0.152 | 0.502 |
Number of reflections | 250547 | |
<I/σ(I)> | 5.1 | 1.4 |
Completeness [%] | 92.4 | 92.5 |
Redundancy | 2.5 | 2.4 |
CC(1/2) | 0.990 | 0.619 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291 | 0.2 M sodium acetate, 0.1 M tri-sodium citrate pH 5.5, 5% (w/v) polyethylene glycol 4000 |