5UJC
Crystal structure of a C.elegans B12-trafficking protein CblC, a human MMACHC homologue
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-22 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.03325 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.008, 66.089, 92.826 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.840 - 1.350 |
R-factor | 0.13361 |
Rwork | 0.132 |
R-free | 0.16303 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3sbz |
RMSD bond length | 0.015 |
RMSD bond angle | 2.013 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.840 | 1.370 |
High resolution limit [Å] | 1.350 | 1.350 |
Rmerge | 0.054 | 0.573 |
Rpim | 0.029 | 0.435 |
Number of reflections | 66799 | 2029 |
<I/σ(I)> | 15 | 1.9 |
Completeness [%] | 92.9 | 58.7 |
Redundancy | 3.8 | 2.3 |
CC(1/2) | 0.997 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 277 | 21.5% PEG 3350, 40 mM Spermidine-HCl, 0.2 M (NH4)2tartarate |