5UGV
DapB from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-23 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 85.507, 88.566, 77.629 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.250 |
R-factor | 0.16679 |
Rwork | 0.165 |
R-free | 0.19982 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1yl6 |
RMSD bond length | 0.020 |
RMSD bond angle | 1.921 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0135) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 2.290 |
High resolution limit [Å] | 2.250 | 2.250 |
Rmerge | 0.060 | 0.652 |
Rmeas | 0.074 | 0.798 |
Rpim | 0.036 | 0.389 |
Number of reflections | 27944 | 1353 |
<I/σ(I)> | 29.6 | 2.1 |
Completeness [%] | 98.4 | 97.1 |
Redundancy | 4 | 3.9 |
CC(1/2) | 0.776 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.2 M lithium sulfate monohydrate, 0.1 M tris pH 8.5, 25% w/v PEG 3350 |