Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5U3D

STRUCTURE OF MEDITOPE ENABLED TRASTUZUMAB I83E VARIANT

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-09-30
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths52.850, 104.650, 116.880
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.430 - 1.770
R-factor0.158
Rwork0.157
R-free0.18500
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ioi
RMSD bond length0.007
RMSD bond angle1.048
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (dev_1839)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.4301.820
High resolution limit [Å]1.7701.770
Rmerge0.0750.760
Number of reflections63311
<I/σ(I)>18.61.88
Completeness [%]99.391.1
Redundancy4.53.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.229350 MM TRIS, PH 7.2, 50 MM NACL, 20% PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon