5TYR
X-ray crystal structure of wild type HIV-1 protease in complex with GRL-121
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-17 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | P 61 |
Unit cell lengths | 62.566, 62.566, 82.666 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.317 - 1.800 |
R-factor | 0.1931 |
Rwork | 0.191 |
R-free | 0.23200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hla |
RMSD bond length | 0.007 |
RMSD bond angle | 1.015 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.090 | 0.550 |
Number of reflections | 20171 | |
<I/σ(I)> | 29.05 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 10 | 10.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.1 M 2-morpholinoethanesulfonic acid (pH 6.5), 25% (w/v) polyethylene glycol 4000, 0.2 M potassium iodide |