5TYQ
Crystal structure of a holoenzyme methyltransferase involved in the biosynthesis of gentamicin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-29 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.692, 66.922, 68.849 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.903 - 2.163 |
R-factor | 0.1969 |
Rwork | 0.194 |
R-free | 0.21600 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.179 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 47.903 |
High resolution limit [Å] | 2.163 |
Rmerge | 0.175 |
Number of reflections | 16909 |
<I/σ(I)> | 17.01 |
Completeness [%] | 99.5 |
Redundancy | 11.6 |
CC(1/2) | 0.990 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | magnesium chloride, Tris, PEG 3350, PEG 400 |