5TXS
Crystal structure of an anaplastic lymphoma kinase-derived neuroblastoma tumor antigen bound to the Human Major Histocompatibility Complex Class I molecule HLA-B*1501
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 77 |
Detector technology | PIXEL |
Collection date | 2016-10-17 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.442, 82.186, 109.847 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.840 - 1.697 |
R-factor | 0.157 |
Rwork | 0.155 |
R-free | 0.19640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1xr8 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.340 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.750 |
High resolution limit [Å] | 1.690 | 1.690 |
Rmerge | 0.096 | 0.744 |
Number of reflections | 51234 | |
<I/σ(I)> | 11.22 | 1.83 |
Completeness [%] | 99.9 | 99.3 |
Redundancy | 8.8 | 8.6 |
CC(1/2) | 0.998 | 0.812 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 0.1 M HEPES (6.5) 20% PEG 6000 |