5TRR
Structure of Mycobacterium tuberculosis proteasome in complex with N,C-capped dipeptide PKS2169
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 120.297, 197.700, 165.184 |
Unit cell angles | 90.00, 103.01, 90.00 |
Refinement procedure
Resolution | 47.247 - 3.103 |
R-factor | 0.1725 |
Rwork | 0.171 |
R-free | 0.21030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hfa |
RMSD bond length | 0.007 |
RMSD bond angle | 0.772 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.247 | 3.200 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.106 | 0.483 |
Number of reflections | 131508 | |
<I/σ(I)> | 7.6 | 2.5 |
Completeness [%] | 99.5 | 95.1 |
Redundancy | 3.5 | 3.2 |
CC(1/2) | 0.980 | 0.775 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 277 | 60 mM sodium citrate (pH 6.2) and 14% PEG-3350 |