5TRM
Crystal structure of human GCN5 histone acetyltransferase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2015-08-23 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 173.474, 173.474, 347.637 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.179 - 2.900 |
R-factor | 0.2181 |
Rwork | 0.215 |
R-free | 0.27270 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1z4r |
RMSD bond length | 0.009 |
RMSD bond angle | 0.867 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2152) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.950 |
High resolution limit [Å] | 2.900 | 7.860 | 2.900 |
Rmerge | 0.118 | 0.047 | 0.543 |
Rmeas | 0.129 | 0.051 | 0.600 |
Rpim | 0.051 | 0.018 | 0.252 |
Total number of observations | 726744 | ||
Number of reflections | 117491 | ||
<I/σ(I)> | 6.3 | ||
Completeness [%] | 99.7 | 97.9 | 100 |
Redundancy | 6.2 | 7.7 | 5.6 |
CC(1/2) | 0.999 | 0.845 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 1.8M Sodium formate, 0.1M Sodium acetate pH 4.6 |