5TPX
Bromodomain from Plasmodium Faciparum Gcn5, complexed with compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-09-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.98011 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 75.000, 75.000, 49.620 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.500 - 2.100 |
R-factor | 0.188 |
Rwork | 0.185 |
R-free | 0.23600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4qns |
RMSD bond length | 0.010 |
RMSD bond angle | 0.670 |
Data reduction software | DENZO |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | BUSTER-TNT (2.10.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.550 | 37.550 | 2.140 |
High resolution limit [Å] | 2.100 | 5.690 | 2.100 |
Rmerge | 0.100 | 0.056 | 0.725 |
Number of reflections | 8411 | ||
<I/σ(I)> | 6.8 | ||
Completeness [%] | 96.0 | 92.6 | 89 |
Redundancy | 7.8 | 7.1 | 7.8 |
CC(1/2) | 0.998 | 0.877 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | The protein was crystallized at 293 K in 0.1M CaCl2, 30% PEG 8K, 0.2M NH4SO4 with 2mM compound using the sitting drop method. |