5TBM
Crystal structure of PT2385 bound to HIF2a-B*:ARNT-B* complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 77.2 |
Detector technology | CCD |
Collection date | 2013-07-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.400, 84.097, 41.401 |
Unit cell angles | 90.00, 106.24, 90.00 |
Refinement procedure
Resolution | 28.890 - 1.850 |
R-factor | 0.2406 |
Rwork | 0.237 |
R-free | 0.29970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xt2 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.109 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 28.890 | 70.000 | 1.880 |
High resolution limit [Å] | 1.850 | 5.020 | 1.850 |
Rmerge | 0.035 | 1.077 | |
Rpim | 0.073 | ||
Number of reflections | 20307 | ||
<I/σ(I)> | 269 | 51 | 0.88 |
Completeness [%] | 98.6 | 93.2 | 90.7 |
Redundancy | 3.5 | ||
CC(1/2) | 0.999 | 0.890 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 5.4 | 293 | 50 mM Bis-Tris pH5.4, 16% PEG 3350. use freshly crushed crystal as seed. |