5TBM
Crystal structure of PT2385 bound to HIF2a-B*:ARNT-B* complex
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 19-ID |
| Synchrotron site | APS |
| Beamline | 19-ID |
| Temperature [K] | 77.2 |
| Detector technology | CCD |
| Collection date | 2013-07-15 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9792 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 73.400, 84.097, 41.401 |
| Unit cell angles | 90.00, 106.24, 90.00 |
Refinement procedure
| Resolution | 28.890 - 1.850 |
| R-factor | 0.2406 |
| Rwork | 0.237 |
| R-free | 0.29970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4xt2 |
| RMSD bond length | 0.019 |
| RMSD bond angle | 2.109 |
| Data reduction software | HKL-3000 |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 28.890 | 70.000 | 1.880 |
| High resolution limit [Å] | 1.850 | 5.020 | 1.850 |
| Rmerge | 0.035 | 1.077 | |
| Rpim | 0.073 | ||
| Number of reflections | 20307 | ||
| <I/σ(I)> | 269 | 51 | 0.88 |
| Completeness [%] | 98.6 | 93.2 | 90.7 |
| Redundancy | 3.5 | ||
| CC(1/2) | 0.999 | 0.890 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 5.4 | 293 | 50 mM Bis-Tris pH5.4, 16% PEG 3350. use freshly crushed crystal as seed. |






