5S9W
PanDDA analysis group deposition -- Crystal Structure of Trypanosoma brucei Trypanothione reductase in complex with Z26769872
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-01-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9126 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 79.650, 109.110, 111.970 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 78.140 - 1.960 |
| R-factor | 0.1988 |
| Rwork | 0.196 |
| R-free | 0.24700 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 6rb5 |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.459 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 78.140 | 78.140 | 2.010 |
| High resolution limit [Å] | 1.960 | 8.770 | 1.960 |
| Rmerge | 0.100 | 0.048 | 1.944 |
| Rmeas | 0.109 | 0.053 | 2.195 |
| Rpim | 0.044 | 0.021 | 1.002 |
| Total number of observations | 406778 | 5747 | 23511 |
| Number of reflections | 70595 | ||
| <I/σ(I)> | 9.4 | 31.5 | 0.8 |
| Completeness [%] | 99.9 | 99.5 | 99.8 |
| Redundancy | 5.8 | 6.4 | 4.6 |
| CC(1/2) | 0.998 | 0.998 | 0.323 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8 | 298 | MPD 22%, PEG 3350 14%, imidazole 40 mM pH 8 |
