5RJQ
PanDDA analysis group deposition -- Crystal Structure of PHIP in complex with NCL-00024665
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-09 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97622 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 81.500, 26.920, 55.970 |
Unit cell angles | 90.00, 100.00, 90.00 |
Refinement procedure
Resolution | 40.130 - 1.350 |
R-factor | 0.2048 |
Rwork | 0.204 |
R-free | 0.22390 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3mb3 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.790 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.4) |
Phasing software | REFMAC |
Refinement software | BUSTER (2.10.3 (29-NOV-2019)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.130 | 40.130 | 1.390 |
High resolution limit [Å] | 1.350 | 6.040 | 1.350 |
Rmerge | 0.057 | 0.045 | 0.686 |
Rmeas | 0.069 | 0.055 | 0.921 |
Rpim | 0.038 | 0.030 | 0.608 |
Total number of observations | 74006 | 975 | 3424 |
Number of reflections | 26253 | ||
<I/σ(I)> | 9.9 | 25.1 | 1.1 |
Completeness [%] | 98.6 | 97.8 | 94.1 |
Redundancy | 2.8 | 3 | 1.9 |
CC(1/2) | 0.997 | 0.995 | 0.450 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 277 | 20% PEG 8000, 0.04M potassium phosphate |