5RBX
PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library D10a
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.190, 73.296, 52.495 |
Unit cell angles | 90.00, 108.98, 90.00 |
Refinement procedure
Resolution | 49.690 - 1.000 |
R-factor | 0.1528 |
Rwork | 0.152 |
R-free | 0.15279 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.016 |
RMSD bond angle | 1.971 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 49.690 | 50.000 | 1.030 |
High resolution limit [Å] | 1.000 | 2.900 | 0.970 |
Rmerge | 0.052 | 0.036 | 1.602 |
Rmeas | 0.056 | 0.039 | 1.778 |
Total number of observations | 1199327 | ||
Number of reflections | 142089 | 7118 | 22292 |
<I/σ(I)> | 14.73 | 50.04 | 0.82 |
Completeness [%] | 93.8 | 0.98 | 0.724 |
Redundancy | 6.69 | 6.49 | 3.87 |
CC(1/2) | 0.999 | 0.997 | 0.312 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000 |