5R2A
PanDDA analysis group deposition -- Endothiapepsin in complex with fragment F2X-Entry H02, DMSO-free
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-30 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.827 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.261, 72.943, 52.696 |
Unit cell angles | 90.00, 109.52, 90.00 |
Refinement procedure
Resolution | 42.659 - 1.049 |
R-factor | 0.1351 |
Rwork | 0.135 |
R-free | 0.14720 |
Structure solution method | FOURIER SYNTHESIS |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.659 | 50.000 | 1.110 |
High resolution limit [Å] | 1.050 | 3.140 | 1.050 |
Rmerge | 0.078 | 0.048 | 1.980 |
Rmeas | 0.084 | 0.051 | 2.136 |
Total number of observations | 1032012 | ||
Number of reflections | 147294 | 5733 | 22951 |
<I/σ(I)> | 9.6 | 39.52 | 0.71 |
Completeness [%] | 97.7 | 0.994 | 0.944 |
Redundancy | 6.999 | 7.01 | 6.54 |
CC(1/2) | 0.999 | 0.998 | 0.403 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 290 | 0.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG4000 |