5QOH
PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with XST00000847b
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04-1 |
| Synchrotron site | Diamond |
| Beamline | I04-1 |
| Detector technology | PIXEL |
| Collection date | 2016-12-05 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.92819 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 48.760, 61.370, 66.400 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.110 - 1.930 |
| R-factor | 0.1883 |
| Rwork | 0.186 |
| R-free | 0.24590 |
| Structure solution method | FOURIER SYNTHESIS |
| Starting model (for MR) | 5mp0 |
| RMSD bond length | 0.018 |
| RMSD bond angle | 1.876 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.29) |
| Phasing software | REFMAC |
| Refinement software | REFMAC (5.8.0189) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 39.300 | 39.300 | 1.980 |
| High resolution limit [Å] | 1.930 | 8.630 | 1.930 |
| Rmerge | 0.074 | 0.022 | 0.812 |
| Rmeas | 0.080 | 0.024 | 0.880 |
| Rpim | 0.031 | 0.010 | 0.337 |
| Total number of observations | 100412 | 1176 | 7576 |
| Number of reflections | 15554 | ||
| <I/σ(I)> | 15.6 | 53.6 | 2.4 |
| Completeness [%] | 99.9 | 99.4 | 100 |
| Redundancy | 6.5 | 5.5 | 6.7 |
| CC(1/2) | 0.999 | 1.000 | 0.724 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 4.5 | 277 | 0.1 M acetate, pH 4.5, 5-25% PEG3350 |
