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5PB1

Crystal Structure of Factor VIIa in complex with benzenecarboximidamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2006-07-14
DetectorMAR scanner 345 mm plate
Wavelength(s)1.00000
Spacegroup nameP 41 21 2
Unit cell lengths95.676, 95.676, 117.961
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.790 - 1.900
R-factor0.1908
Rwork0.190
R-free0.21050
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)inhouse model
RMSD bond length0.011
RMSD bond angle1.318
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.860
High resolution limit [Å]1.8003.8811.800
Rmerge0.0990.0590.610
Total number of observations353441
Number of reflections51285
<I/σ(I)>19
Completeness [%]99.798.399.7
Redundancy6.96.75.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.527716 mg/ml protein in 20mM Tris/HCl pH 8.4, 5 mM benzamidine, 0.1 M NaCl, 50 mM CaCl2 mixed 1+1 with 32-35% AMMONIUM SULPHATE, 2% PEG 4000, 0.1 M Bicine-NaOH pH 8.5, 15% glycerol

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