5OPY
Crystal structure of anti-alphaVbeta3 integrin Fab LM609
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-09-18 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 51.810, 82.350, 92.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.160 - 2.260 |
R-factor | 0.2147 |
Rwork | 0.213 |
R-free | 0.25500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2adg |
RMSD bond length | 0.010 |
RMSD bond angle | 1.250 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.160 | 2.360 |
High resolution limit [Å] | 2.260 | 2.260 |
Rmerge | 0.088 | 0.496 |
Number of reflections | 19133 | 9085 |
<I/σ(I)> | 12.7 | 3.3 |
Completeness [%] | 99.8 | 98.7 |
Redundancy | 5.3 | 5.3 |
CC(1/2) | 0.997 | 0.759 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 291.15 | 0.1M HEPES pH 7.5, 30% PEG 4,000 and 0.2M CaCl2 |