5OPX
Crystal structure of the GroEL mutant A109C in complex with GroES and ADP BeF2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-08-25 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.96600 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 217.567, 230.504, 235.391 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.010 - 3.640 |
R-factor | 0.2324 |
Rwork | 0.231 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | pdbid 4PKN |
RMSD bond length | 0.011 |
RMSD bond angle | 1.588 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP (11.2.08) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.010 | 49.370 | 3.700 |
High resolution limit [Å] | 3.640 | 19.940 | 3.640 |
Rmerge | 0.165 | 0.032 | 1.161 |
Rmeas | 0.185 | 0.037 | 1.294 |
Rpim | 0.080 | 0.017 | 0.557 |
Number of reflections | 132375 | 835 | 6484 |
<I/σ(I)> | 7.9 | ||
Completeness [%] | 99.8 | 92.5 | 99.9 |
Redundancy | 4.9 | 4.1 | 5 |
CC(1/2) | 0.997 | 0.999 | 0.545 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 10 mM ATP, 3 mM BeF2, 0.1 M Tris, pH 8.0, 0.2 M NaCl and 20 % PEG 4000 |