Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OPI

Crystal structure of the TAPBPR-MHC I peptide editing complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]80
Detector technologyPIXEL
Collection date2017-04-08
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.99999815963
Spacegroup nameP 65 2 2
Unit cell lengths205.040, 205.040, 121.300
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution49.249 - 3.300
R-factor0.2451
Rwork0.242
R-free0.30270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3ws6 2yxf 3f8u
RMSD bond length0.007
RMSD bond angle1.547
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((dev_2747: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.2503.400
High resolution limit [Å]3.3003.300
Number of reflections23094
<I/σ(I)>8.810.64
Completeness [%]99.999.8
Redundancy26.527.9
CC(1/2)0.9970.309
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291.1519% PEG400, 5% poly-gamma-glutamic acid, and 450 mM sodium cacodylate pH 6.5

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon