Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OMD

Crystal structure of S. cerevisiae Ddc2 N-terminal coiled-coil domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-05-06
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.00005
Spacegroup nameP 2 2 21
Unit cell lengths116.940, 19.890, 30.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.980 - 2.100
R-factor0.2333
Rwork0.228
R-free0.26950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1a92
RMSD bond length0.010
RMSD bond angle1.150
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwareBUSTER (2.11.5)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.150
High resolution limit [Å]2.1002.100
Number of reflections4644330
<I/σ(I)>13.232.19
Completeness [%]99.898.5
Redundancy6.085.72
CC(1/2)0.9990.706
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.1 M Tris-HCl, 24% PEG 400

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon